1 - The slip-on muffler does give a power increase (Can't speak for Micron who have gone bust, Scorpion, Laser or Racefit), see the link:
R6 Technical Information - Akrapovic slip-on
2 - You won't get an e-marked (road legal) full system for the 08 R6. Due to the new Euro-3 emissions regulations, you must have a cat in the system... unless some-one has bodged on an e-marked muffler that fits.
...Not an issue if you are racing, but pointless for road use (in my opinion).
3 - Power commanders are not required for Akrapovic exhaust systems, they are all dyno-developed to run on standard fuelling (that's what you pay the extra money for)... Again, only really required for track use/further tuning. Otherwise, just a waste of £280 plus dyno time & filter.
Standard fuelling power: Dyno (system)
4 - Exup valves are a thing of the past... most modern sportsbikes now come with a noise valve. These are commonly mistaken a exup valves, but do not actually effect the fuelling/ECU. If the cables come loose, they flag an FI light on the dash - this is just to let you know that something has come loose.
The sole function of this valve is to half-close between 3500-5000 rpm in second gear to drop the decibel output. This is where all EU Spec. bikes are tested for noise before they are allowed to go on sale as a road legal bike.